STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV83857.1COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (303 aa)    
Predicted Functional Partners:
KCV83856.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
0.975
KCV81275.1
Sensor protein; COG0642 Signal transduction histidine kinase.
 0.971
KCV81889.1
PAS sensor protein; COG0642 Signal transduction histidine kinase.
 
 0.964
KCV81698.1
Sensor protein FixL; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
  
 0.943
KCV83789.1
Sensor kinase-like protein; COG5002 Signal transduction histidine kinase.
  
0.937
KCV82045.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 0.878
KCV83855.1
ABC transporter substrate-binding protein; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
  
  0.867
KCV82607.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 0.865
KCV81145.1
EAL domain-containing protein; COG2200 FOG: EAL domain.
 
 
  
 0.864
KCV82769.1
EAL domain-containing protein; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 0.862
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.