STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crcBCamphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (125 aa)    
Predicted Functional Partners:
KCV82757.1
Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
     
 0.863
KCV82759.1
ATP12 ATPase; COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase.
       0.849
KCV82758.1
Hydrolase; COG0546 Predicted phosphatases.
  
    0.824
KCV82755.1
COG3658 Cytochrome b.
 
     0.659
KCV82760.1
Glutamate/glutamine/aspartate/asparagine ABC transporter substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
       0.637
KCV82753.1
Recombination factor protein RarA; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase.
       0.624
KCV82754.1
Cytochrome c, class II; COG3909 Cytochrome c556.
       0.592
KCV82761.1
COG4597 ABC-type amino acid transport system, permease component.
       0.430
KCV81766.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
  
  
 0.430
KCV82762.1
COG0765 ABC-type amino acid transport system, permease component.
       0.422
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.