STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82444.1Hypothetical protein; COG0433 Predicted ATPase. (691 aa)    
Predicted Functional Partners:
KCV82445.1
Hypothetical protein; COG0556 Helicase subunit of the DNA excision repair complex.
       0.774
KCV81778.1
Sugar ABC transporter substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
  
     0.754
KCV82451.1
Hypothetical protein.
  
     0.614
KCV82454.1
COG1961 Site-specific recombinases, DNA invertase Pin homologs.
 
     0.606
KCV81776.1
COG1175 ABC-type sugar transport systems, permease components.
  
     0.499
KCV81777.1
COG0395 ABC-type sugar transport system, permease component.
  
     0.487
KCV82446.1
Hypothetical protein.
       0.463
KCV81967.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.430
KCV81106.1
Hypothetical protein.
  
     0.420
KCV82495.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.