STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82559.1Photosynthetic apparatus regulatory protein RegA; COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. (184 aa)    
Predicted Functional Partners:
KCV82557.1
COG0642 Signal transduction histidine kinase.
 
 0.993
KCV81889.1
PAS sensor protein; COG0642 Signal transduction histidine kinase.
  
 0.884
KCV81698.1
Sensor protein FixL; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
  
 
 0.862
KCV81275.1
Sensor protein; COG0642 Signal transduction histidine kinase.
    
 0.807
KCV83308.1
Two-component system hybrid kinase; COG0642 Signal transduction histidine kinase.
  
 0.799
KCV83856.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
  
 0.799
KCV82045.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
  
 0.799
KCV81764.1
Two-component sensor histidine kinase/response regulator hybrid protein; COG0642 Signal transduction histidine kinase.
  
 0.799
KCV81715.1
COG0591 Na+/proline symporter.
   
 0.781
KCV82560.1
Hypothetical protein.
       0.773
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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