STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82564.1Hypothetical protein; COG1200 RecG-like helicase. (197 aa)    
Predicted Functional Partners:
KCV81941.1
NADH-ubiquinone oxidoreductase; COG0290 Translation initiation factor 3 (IF-3).
  
  
 0.773
KCV81435.1
Putative modular PKS system; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
   
 0.633
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.516
KCV83711.1
COG2124 Cytochrome P450.
   
 
 0.513
KCV80819.1
16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
  
    0.464
KCV81582.1
COG3220 Uncharacterized protein conserved in bacteria; Belongs to the UPF0276 family.
   
    0.455
KCV83275.1
Decarboxylase, group II; COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
   
 
 0.446
KCV82561.1
Acetyltransferase; COG1247 Sortase and related acyltransferases.
       0.436
KCV81436.1
Putative modular PKS system; COG3321 Polyketide synthase modules and related proteins; Belongs to the P-Pant transferase superfamily.
    
 0.436
KCV82562.1
Hypothetical protein.
       0.432
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.