STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82688.1Hypothetical protein. (105 aa)    
Predicted Functional Partners:
mutL
DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
       0.610
KCV82687.1
RmuC domain-containing protein; COG1322 Uncharacterized protein conserved in bacteria.
       0.607
KCV81655.1
COG2841 Uncharacterized protein conserved in bacteria.
  
     0.526
KCV81818.1
Hypothetical protein; COG0438 Glycosyltransferase.
  
     0.518
KCV81554.1
Hypothetical protein.
  
     0.453
KCV80811.1
Hypothetical protein; COG0434 Predicted TIM-barrel enzyme.
  
     0.452
KCV81210.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.439
KCV83059.1
Hypothetical protein; COG2391 Predicted transporter component.
  
     0.426
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.