STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82201.1COG0346 Lactoylglutathione lyase and related lyases. (151 aa)    
Predicted Functional Partners:
KCV82202.1
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
 
  0.811
KCV82873.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.794
KCV81643.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.794
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.676
KCV81766.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
  
 
  0.601
dnaQ
DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.
 
    0.577
KCV82203.1
Hypothetical protein.
       0.559
KCV82204.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.559
KCV81614.1
COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
    0.544
KCV81158.1
COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
    0.544
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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