STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82224.1COG2154 Pterin-4a-carbinolamine dehydratase. (53 aa)    
Predicted Functional Partners:
KCV82223.1
COG3146 Uncharacterized protein conserved in bacteria.
  
    0.852
KCV82221.1
Endoribonuclease L-PSP; COG0251 Putative translation initiation inhibitor, yjgF family.
  
    0.799
KCV82222.1
COG0584 Glycerophosphoryl diester phosphodiesterase.
   
   0.780
KCV82220.1
Type I secretion membrane fusion protein, HlyD family; COG0845 Membrane-fusion protein.
 
     0.713
KCV82219.1
COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
       0.618
KCV82212.1
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
  
  
 0.616
KCV82225.1
COG0668 Small-conductance mechanosensitive channel.
       0.609
KCV83014.1
methylmalonyl-CoA epimerase; COG0346 Lactoylglutathione lyase and related lyases.
  
  
 0.557
KCV82218.1
VacJ family lipoprotein; COG2853 Surface lipoprotein.
       0.475
KCV82217.1
Toluene tolerance family protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
       0.474
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.