STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82292.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
KCV83109.1
Hypothetical protein.
  
     0.604
KCV83263.1
COG3714 Predicted membrane protein.
  
     0.593
KCV83739.1
Hypothetical protein.
  
     0.584
KCV82751.1
COG3916 N-acyl-L-homoserine lactone synthetase; Belongs to the autoinducer synthase family.
  
     0.577
KCV82293.1
COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
       0.486
KCV82294.1
Taurine-binding periplasmic protein; COG4521 ABC-type taurine transport system, periplasmic component.
       0.486
KCV82259.1
Putative lipoprotein.
  
     0.470
KCV83256.1
DNA-binding protein HU; COG0776 Bacterial nucleoid DNA-binding protein.
  
     0.467
KCV83028.1
Hypothetical protein.
  
     0.465
KCV80890.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.