STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82312.1COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. (262 aa)    
Predicted Functional Partners:
KCV82311.1
4Fe-4S ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
    
 0.825
KCV82391.1
Dihydropyrimidine dehydrogenase subunit A; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
     
 0.655
KCV82310.1
COG3536 Uncharacterized protein conserved in bacteria.
       0.524
KCV82309.1
Oxidoreductase; COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
    
 0.522
KCV82308.1
COG1146 Ferredoxin.
    
 0.494
KCV83248.1
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
 
 0.493
KCV81443.1
Putative short-chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
     
 0.479
KCV81884.1
COG3588 Fructose-1,6-bisphosphate aldolase.
     
 0.411
KCV82307.1
Hypothetical protein; COG1413 FOG: HEAT repeat.
       0.409
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.