STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82321.1Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. (347 aa)    
Predicted Functional Partners:
KCV83310.1
WecB/TagA/CpsF family glycosyl transferase; COG1922 Teichoic acid biosynthesis proteins.
  
  
 0.836
KCV81033.1
Hypothetical protein; RB137; COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
  
 0.817
KCV82576.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
  
 0.611
KCV82318.1
COG0438 Glycosyltransferase.
 
 
 0.576
KCV82325.1
COG0438 Glycosyltransferase.
  
 
 0.557
KCV82314.1
Hypothetical protein; RB138; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.489
KCV82323.1
Sulfotransferase family protein.
       0.481
KCV82322.1
Sulfotransferase; COG0457 FOG: TPR repeat.
       0.471
KCV82833.1
Undecaprenyl-phosphate galactosephosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.459
KCV83489.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.457
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.