STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82327.1Hemolysin-type calcium-binding protein; COG2931 RTX toxins and related Ca2+-binding proteins. (1035 aa)    
Predicted Functional Partners:
KCV80776.1
COG2931 RTX toxins and related Ca2+-binding proteins.
  
  0.799
KCV81164.1
Hemolysin-type calcium-binding repeat family protein; COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.775
KCV82220.1
Type I secretion membrane fusion protein, HlyD family; COG0845 Membrane-fusion protein.
 
    0.643
KCV83023.1
Hypothetical protein.
  
  0.602
KCV81567.1
Phospholipase/lecithinase/hemolysin-like protein; COG3240 Phospholipase/lecithinase/hemolysin.
  
 
 
0.576
KCV81568.1
Phospholipase/lecithinase/hemolysin-like protein; COG3240 Phospholipase/lecithinase/hemolysin.
  
 
 
0.575
KCV82219.1
COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
 
   0.570
KCV80888.1
COG0845 Membrane-fusion protein.
  
    0.537
KCV83026.1
COG0845 Membrane-fusion protein.
 
    0.526
KCV81008.1
Serralysin; COG2931 RTX toxins and related Ca2+-binding proteins.
 
     0.510
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.