STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82330.1Hypothetical protein; COG3488 Predicted thiol oxidoreductase. (509 aa)    
Predicted Functional Partners:
KCV82329.1
Hypothetical protein; COG3489 Predicted periplasmic lipoprotein.
 
  
 0.985
KCV82331.1
Peptidase M75; COG3487 Uncharacterized iron-regulated protein.
    0.982
KCV82328.1
COG3490 Uncharacterized protein conserved in bacteria.
 
  
 0.980
KCV83524.1
Family 1 extracellular solute-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
 
    0.426
KCV82847.1
Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
   
    0.422
KCV82385.1
Hypothetical protein; COG5266 ABC-type Co2+ transport system, periplasmic component.
   
    0.412
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.