STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81902.1Rod shape-determining protein MreD. (179 aa)    
Predicted Functional Partners:
KCV81901.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
  
    0.851
KCV81899.1
D-isomer specific 2-hydroxyacid dehydrogenase; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases.
       0.849
mrdB
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
       0.849
KCV81903.1
COG1792 Cell shape-determining protein.
       0.849
KCV81904.1
Rod shape-determining protein MreB; COG1077 Actin-like ATPase involved in cell morphogenesis.
       0.781
KCV80822.1
Hypothetical protein.
  
     0.742
KCV83069.1
Hypothetical protein.
  
     0.729
KCV80937.1
Hypothetical protein.
  
     0.663
KCV83018.1
Hypothetical protein.
  
     0.661
KCV83100.1
Hypothetical protein.
  
    0.649
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.