STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81952.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
KCV81951.1
COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2.
       0.596
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.426
KCV81946.1
3-oxoadipate enol-lactonase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.408
KCV81947.1
Endonuclease/exonuclease/phosphatase domain-containing protein.
       0.408
KCV81948.1
Pyridoxal-phosphate dependent enzyme; COG1171 Threonine dehydratase.
       0.408
KCV81949.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.408
KCV81950.1
Haloacid dehalogenase; COG1011 Predicted hydrolase (HAD superfamily).
       0.408
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.