STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82113.1DoxX family protein; COG2259 Predicted membrane protein. (140 aa)    
Predicted Functional Partners:
KCV81766.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
 
 
  0.794
KCV82114.1
NADP oxidoreductase coenzyme F420-dependent protein; COG2085 Predicted dinucleotide-binding enzymes.
 
   
 0.784
KCV82115.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.719
KCV82112.1
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B.
 
  
 0.654
KCV80862.1
Sulfite oxidase cytochrome subunit; COG2010 Cytochrome c, mono- and diheme variants.
  
 
  0.641
KCV82111.1
COG0435 Predicted glutathione S-transferase.
 
    0.611
KCV81583.1
Hypothetical protein.
  
  
 0.575
KCV81582.1
COG3220 Uncharacterized protein conserved in bacteria; Belongs to the UPF0276 family.
  
  
 0.554
KCV83287.1
Hypothetical protein; COG1252 NADH dehydrogenase, FAD-containing subunit.
  
 0.457
msrP
TMAO/DMSO reductase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) [...]
  
 
 0.413
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.