STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV82114.1NADP oxidoreductase coenzyme F420-dependent protein; COG2085 Predicted dinucleotide-binding enzymes. (191 aa)    
Predicted Functional Partners:
KCV82113.1
DoxX family protein; COG2259 Predicted membrane protein.
 
   
 0.784
KCV82115.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.664
KCV82112.1
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B.
       0.525
KCV82111.1
COG0435 Predicted glutathione S-transferase.
       0.472
KCV82116.1
Hypothetical protein.
       0.403
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.