STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81681.1Transcriptional regulatory protein QseB; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (221 aa)    
Predicted Functional Partners:
KCV81682.1
Sensor protein QseC; COG0642 Signal transduction histidine kinase.
  0.979
KCV81889.1
PAS sensor protein; COG0642 Signal transduction histidine kinase.
 0.960
KCV81683.1
Putative periplasmic iron-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
 
  
  0.939
KCV82795.1
COG0642 Signal transduction histidine kinase.
 
  0.907
KCV83600.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
   
 0.904
KCV82045.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
 
 0.873
KCV81764.1
Two-component sensor histidine kinase/response regulator hybrid protein; COG0642 Signal transduction histidine kinase.
 0.850
KCV81698.1
Sensor protein FixL; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
 
 
 0.834
KCV83659.1
COG0642 Signal transduction histidine kinase.
 0.816
KCV83308.1
Two-component system hybrid kinase; COG0642 Signal transduction histidine kinase.
 0.815
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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