STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81692.1ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (385 aa)    
Predicted Functional Partners:
KCV81694.1
ABC transporter permease; COG0395 ABC-type sugar transport system, permease component.
 0.984
KCV81693.1
ABC transporter permease; COG1175 ABC-type sugar transport systems, permease components.
 
  0.983
KCV81695.1
ABC transporter extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
  0.943
KCV81777.1
COG0395 ABC-type sugar transport system, permease component.
  0.931
KCV81776.1
COG1175 ABC-type sugar transport systems, permease components.
  
  0.927
KCV81401.1
ABC transporter permease; COG0395 ABC-type sugar transport system, permease component.
 
 0.856
KCV81318.1
Inner membrane ABC transporter permease; COG1175 ABC-type sugar transport systems, permease components.
  
  0.848
KCV83763.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
  0.838
KCV81400.1
Binding-protein-dependent transport system inner membrane protein; COG1175 ABC-type sugar transport systems, permease components.
  
  0.833
KCV81319.1
Binding-protein-dependent transport system inner membrane protein; COG0395 ABC-type sugar transport system, permease component.
 0.833
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.