STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81760.1COG0069 Glutamate synthase domain 2; Belongs to the glutamate synthase family. (441 aa)    
Predicted Functional Partners:
KCV81761.1
COG0070 Glutamate synthase domain 3.
  0.999
KCV81762.1
Glutamine amidotransferase; COG0067 Glutamate synthase domain 1.
 
  0.994
KCV82391.1
Dihydropyrimidine dehydrogenase subunit A; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
 0.986
KCV82390.1
Glutamate synthase (NADPH) large subunit; COG0067 Glutamate synthase domain 1.
 
0.970
KCV82235.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.959
KCV81757.1
COG4311 Sarcosine oxidase delta subunit.
 
  
  0.927
KCV81755.1
Sarcosine oxidase, gamma subunit.
 
  
  0.925
KCV81758.1
Sarcosine oxidase beta subunit family protein; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
  
  0.925
KCV81759.1
COG0174 Glutamine synthetase.
 
 
  0.925
KCV81756.1
Sarcosine oxidase alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
  
  0.924
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.