Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KCV81431.1 | KCV81786.1 | ATO10_12519 | ATO10_10585 | C4-dicarboxylate transport transcriptional regulatory protein DctD; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.789 |
| KCV81431.1 | KCV81889.1 | ATO10_12519 | ATO10_08588 | C4-dicarboxylate transport transcriptional regulatory protein DctD; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | PAS sensor protein; COG0642 Signal transduction histidine kinase. | 0.709 |
| KCV81431.1 | KCV82126.1 | ATO10_12519 | ATO10_09783 | C4-dicarboxylate transport transcriptional regulatory protein DctD; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | Transcriptional regulator; COG2202 FOG: PAS/PAC domain. | 0.408 |
| KCV81779.1 | KCV81786.1 | ATO10_10550 | ATO10_10585 | Acetoin catabolism regulatory protein; COG3284 Transcriptional activator of acetoin/glycerol metabolism. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.840 |
| KCV81786.1 | KCV81431.1 | ATO10_10585 | ATO10_12519 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | C4-dicarboxylate transport transcriptional regulatory protein DctD; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.789 |
| KCV81786.1 | KCV81779.1 | ATO10_10585 | ATO10_10550 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Acetoin catabolism regulatory protein; COG3284 Transcriptional activator of acetoin/glycerol metabolism. | 0.840 |
| KCV81786.1 | KCV81889.1 | ATO10_10585 | ATO10_08588 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS sensor protein; COG0642 Signal transduction histidine kinase. | 0.883 |
| KCV81786.1 | KCV82044.1 | ATO10_10585 | ATO10_09363 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two component, sigma-54 specific, transcriptional regulator; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.801 |
| KCV81786.1 | KCV82126.1 | ATO10_10585 | ATO10_09783 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator; COG2202 FOG: PAS/PAC domain. | 0.829 |
| KCV81786.1 | KCV83729.1 | ATO10_10585 | ATO10_03175 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Nitrogen assimilation regulatory protein NtrX; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.789 |
| KCV81786.1 | rpoA | ATO10_10585 | ATO10_04032 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.930 |
| KCV81786.1 | rpoB | ATO10_10585 | ATO10_15490 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.932 |
| KCV81786.1 | rpoC | ATO10_10585 | ATO10_15485 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.986 |
| KCV81786.1 | rpoZ | ATO10_10585 | ATO10_07342 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.904 |
| KCV81889.1 | KCV81431.1 | ATO10_08588 | ATO10_12519 | PAS sensor protein; COG0642 Signal transduction histidine kinase. | C4-dicarboxylate transport transcriptional regulatory protein DctD; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.709 |
| KCV81889.1 | KCV81786.1 | ATO10_08588 | ATO10_10585 | PAS sensor protein; COG0642 Signal transduction histidine kinase. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.883 |
| KCV81889.1 | KCV82044.1 | ATO10_08588 | ATO10_09363 | PAS sensor protein; COG0642 Signal transduction histidine kinase. | Two component, sigma-54 specific, transcriptional regulator; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.658 |
| KCV81889.1 | KCV82126.1 | ATO10_08588 | ATO10_09783 | PAS sensor protein; COG0642 Signal transduction histidine kinase. | Transcriptional regulator; COG2202 FOG: PAS/PAC domain. | 0.879 |
| KCV81889.1 | KCV83729.1 | ATO10_08588 | ATO10_03175 | PAS sensor protein; COG0642 Signal transduction histidine kinase. | Nitrogen assimilation regulatory protein NtrX; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.700 |
| KCV81889.1 | rpoB | ATO10_08588 | ATO10_15490 | PAS sensor protein; COG0642 Signal transduction histidine kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.409 |
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