STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81485.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
KCV81484.1
Polyhydroxyalkonate synthesis repressor PhaR; COG5394 Uncharacterized protein conserved in bacteria.
 
   
 0.909
KCV81487.1
COG4553 Poly-beta-hydroxyalkanoate depolymerase.
 
   
 0.866
KCV83770.1
Hypothetical protein.
  
     0.773
KCV83274.1
COG3409 Putative peptidoglycan-binding domain-containing protein.
  
     0.771
KCV80797.1
Lipoprotein.
  
     0.767
KCV81708.1
Hypothetical protein.
  
     0.765
KCV83405.1
Hypothetical protein; COG3926 Putative secretion activating protein.
  
     0.762
KCV81466.1
Hypothetical protein.
  
     0.754
KCV80822.1
Hypothetical protein.
  
     0.747
KCV81802.1
Hypothetical protein.
  
     0.723
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.