STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81486.1COG3243 Poly(3-hydroxyalkanoate) synthetase. (543 aa)    
Predicted Functional Partners:
KCV81487.1
COG4553 Poly-beta-hydroxyalkanoate depolymerase.
 
  
 0.975
KCV81244.1
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; COG2030 Acyl dehydratase.
 
 0.899
KCV81143.1
acetoacetyl-CoA reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
 0.890
KCV81484.1
Polyhydroxyalkonate synthesis repressor PhaR; COG5394 Uncharacterized protein conserved in bacteria.
 
   
 0.856
KCV82060.1
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
     
 0.812
KCV81887.1
Dehydratase; COG2030 Acyl dehydratase.
 
  
 0.750
KCV82968.1
COG2030 Acyl dehydratase.
 
  
 0.747
KCV81709.1
NAD-binding 3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
     
 0.725
KCV81485.1
Hypothetical protein.
 
   
 0.712
KCV83695.1
Patatin; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
 
   
 0.652
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.