STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81503.1COG3563 Capsule polysaccharide export protein. (666 aa)    
Predicted Functional Partners:
KCV81502.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
  
 0.983
KCV81892.1
COG3524 Capsule polysaccharide export protein.
 
  
 0.962
KCV81893.1
Capsule polysaccharide export ATP-binding protein KpsT; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.962
KCV82475.1
Hypothetical protein.
 
  
 0.961
KCV81501.1
COG3562 Capsule polysaccharide export protein.
   
 0.959
KCV82469.1
Hypothetical protein.
 
    0.772
KCV82470.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    0.767
KCV81871.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.760
KCV82468.1
core-2/I-branching enzyme family protein.
  
     0.756
KCV82467.1
Hypothetical protein.
  
     0.741
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.