STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81513.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
KCV83088.1
Type II secretion system protein; COG2064 Flp pilus assembly protein TadC.
 
  
 0.971
KCV81512.1
Hypothetical protein.
 
    0.971
KCV83087.1
Type II secretion system protein; COG2064 Flp pilus assembly protein TadC.
 
    0.964
KCV81511.1
Hypothetical protein.
 
    0.947
KCV82395.1
COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase).
   
    0.940
KCV83093.1
COG3745 Flp pilus assembly protein CpaB.
 
  
 0.889
KCV83090.1
Chromosome partitioning ATPase; COG4963 Flp pilus assembly protein, ATPase CpaE.
 
  
 0.879
KCV82516.1
Hpt domain-containing protein; COG2198 FOG: HPt domain.
  
    0.842
KCV83095.1
Hypothetical protein.
 
  
 0.819
KCV83083.1
Hypothetical protein; COG0606 Predicted ATPase with chaperone activity.
 
    0.817
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.