STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81354.1COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family. (295 aa)    
Predicted Functional Partners:
KCV81355.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.999
KCV81011.1
Inner-membrane translocator; COG4177 ABC-type branched-chain amino acid transport system, permease component; overlaps another CDS with the same product name.
 
  0.969
KCV81667.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.965
KCV81721.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  0.963
KCV81351.1
ATP-binding ABC transporter protein; COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
  0.956
KCV81353.1
COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
  0.952
KCV83644.1
COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.929
KCV81352.1
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
  0.927
KCV81668.1
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
  0.885
KCV81722.1
ABC transporter-like protein; COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.847
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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