STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81216.1Iron-sulfur-binding protein RdxA/RdxB/FixG family; COG0348 Polyferredoxin. (476 aa)    
Predicted Functional Partners:
KCV81214.1
Cytochrome c oxidase; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.996
KCV81211.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.993
KCV81212.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
  
 0.992
KCV81217.1
FixH family protein.
 
  
 0.992
KCV81213.1
Cytochrome c oxidase, cbb3-type subunit IV.
 
  
 0.976
KCV81219.1
Cbb3-type cytochrome oxidase maturation protein; COG3197 Uncharacterized protein, possibly involved in nitrogen fixation.
 
  
 0.969
KCV81218.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
 
  
 0.958
KCV82038.1
Hypothetical protein.
   
    0.940
KCV81655.1
COG2841 Uncharacterized protein conserved in bacteria.
   
    0.940
KCV81208.1
COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases.
 
  
 0.861
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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