STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81052.1COG3702 Type IV secretory pathway, VirB3 components. (92 aa)    
Predicted Functional Partners:
KCV81051.1
CagE, TrbE, VirB component of type IV transporter system; COG3451 Type IV secretory pathway, VirB4 components.
 
 
 0.999
KCV81047.1
Hypothetical protein; RC164; COG3736 Type IV secretory pathway, component VirB8.
 
 
 0.994
KCV81045.1
Conjugation TrbI-like protein; COG2948 Type IV secretory pathway, VirB10 components.
 
  
 0.988
KCV81046.1
Conjugal transfer protein TrbG/VirB9/CagX; COG3504 Type IV secretory pathway, VirB9 components.
 
  
 0.988
KCV81041.1
TrbL/VirB6 plasmid conjugal transfer protein; COG3704 Type IV secretory pathway, VirB6 components.
 
  
 0.987
KCV81053.1
VIRB2 type IV secretion.
 
   
 0.968
KCV81048.1
Hypothetical protein; RC163; COG0466 ATP-dependent Lon protease, bacterial type.
 
     0.933
KCV81049.1
Hypothetical protein; RC162; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
   
 0.933
KCV81055.1
Hypothetical protein.
 
     0.913
KCV81044.1
Type II secretion system protein E; COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis.
 
   
 0.898
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.