STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV81107.1parB-like partition protein; COG1475 Predicted transcriptional regulators. (658 aa)    
Predicted Functional Partners:
KCV81105.1
COG4227 Antirestriction protein.
 
     0.880
KCV81106.1
Hypothetical protein.
 
     0.879
KCV81123.1
Putative methylase/helicase.
 
     0.784
KCV81128.1
Hypothetical protein; RC175.
 
     0.783
KCV81099.1
ATPase, ParA type; COG1192 ATPases involved in chromosome partitioning.
 
 
 0.776
KCV81055.1
Hypothetical protein.
  
     0.768
KCV81101.1
Hypothetical protein; RC100.
  
   
 0.765
KCV81056.1
Hypothetical protein.
  
     0.756
KCV81131.1
Relaxase/mobilization nuclease family protein; COG3843 Type IV secretory pathway, VirD2 components (relaxase).
  
     0.727
gidB
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.672
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.