STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV80797.1Lipoprotein. (213 aa)    
Predicted Functional Partners:
KCV80798.1
Aa3 type cytochrome c oxidase subunit IV.
 
     0.782
KCV81485.1
Hypothetical protein.
  
     0.767
KCV80822.1
Hypothetical protein.
  
     0.765
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.761
KCV83543.1
Hypothetical protein.
  
     0.757
KCV83626.1
Hypothetical protein.
  
     0.757
KCV82055.1
Hypothetical protein.
  
     0.751
KCV81802.1
Hypothetical protein.
  
     0.746
KCV81225.1
Hypothetical protein.
  
     0.746
KCV83537.1
Hypothetical protein.
  
     0.732
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.