STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV80756.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
KCV80757.1
Cobalt transporter subunit CbtA; COG5446 Predicted integral membrane protein.
 
     0.907
KCV80759.1
COG5469 Predicted metal-binding protein.
 
    0.832
KCV80758.1
Hypothetical protein.
       0.602
KCV83839.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.492
KCV82593.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
     
 0.490
KCV80958.1
Diguanylate cyclase; COG2199 FOG: GGDEF domain.
  
     0.469
KCV80789.1
Tetratricopeptide repeat protein; COG0457 FOG: TPR repeat.
 
 
  0.466
KCV80755.1
DtxR family iron dependent repressor; COG1321 Mn-dependent transcriptional regulator.
  
  
 0.448
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.426
KCV81256.1
precorrin-6Y C(5,15)-methyltransferase; COG2241 Precorrin-6B methylase 1.
       0.426
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.