STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO9_03280Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)    
Predicted Functional Partners:
ATO9_03275
Cell division protein FtsE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
ATO9_01955
Peptidase M23B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.992
ATO9_03285
Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.877
ATO9_03270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.796
ATO9_06240
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.674
ATO9_18130
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.608
ATO9_14535
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.586
ATO9_06900
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
ATO9_00630
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 
 0.560
Your Current Organism:
Pseudooceanicola atlanticus
NCBI taxonomy Id: 1461694
Other names: KCTC 42004, LMG 27424, LMG:27424, MCCC 1A09160, Oceanicola sp. 22II-S11g, P. atlanticus, Pseudooceanicola atlanticus Lai et al. 2015, strain 22II-S11g
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.