STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQR48297.1Hypothetical protein. (97 aa)    
Predicted Functional Partners:
CQR47031.1
Hypothetical protein.
  
     0.640
CQR46994.1
Hypothetical protein.
  
     0.631
CQR47976.1
SNARE associated Golgi protein.
 
     0.540
CQR47974.1
Helix-turn-helix domain protein.
  
     0.527
cspLA
Cold shock-like protein CspLA.
       0.524
yocK_2
General stress protein 16O.
       0.523
CQR47713.1
Hypothetical protein.
  
     0.519
nprA
Transcriptional activator NprA.
  
     0.518
CQR47589.1
Hypothetical protein.
  
     0.495
ydaG
General stress protein 26.
  
     0.476
Your Current Organism:
Paraliobacillus sp. PM2
NCBI taxonomy Id: 1462524
Other names: P. sp. PM-2, Paraliobacillus sp. PM-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.