STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000750635_03210Unannotated protein. (346 aa)    
Predicted Functional Partners:
GCA_000750635_00747
Unannotated protein.
 
  
 0.948
GCA_000750635_04784
Unannotated protein.
    
 0.937
GCA_000750635_00492
Unannotated protein.
  
  
 
0.899
GCA_000750635_01948
Unannotated protein.
    
 0.879
GCA_000750635_01946
Unannotated protein.
     
 0.861
GCA_000750635_00865
Unannotated protein.
  
  
 0.572
GCA_000750635_03056
Unannotated protein.
    
  0.524
GCA_000750635_00343
Unannotated protein.
 
    0.519
GCA_000750635_03522
Unannotated protein.
  
  
  0.490
GCA_000750635_01004
Unannotated protein.
   
 
  0.482
Your Current Organism:
Oceanobacillus jeddahense
NCBI taxonomy Id: 1462527
Other names: CSUR P1091, DSM 28586, O. jeddahense, Oceanobacillus sp. S5, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.