STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000750635_04898Unannotated protein. (314 aa)    
Predicted Functional Partners:
GCA_000750635_05054
Unannotated protein.
   
 0.952
GCA_000750635_02153
Unannotated protein.
  
 
 0.900
GCA_000750635_01516
Unannotated protein.
    
 0.898
GCA_000750635_00692
Unannotated protein.
    
 0.893
GCA_000750635_00465
Unannotated protein.
    
 0.886
GCA_000750635_00691
Unannotated protein.
  
 
 0.884
GCA_000750635_03783
Unannotated protein.
    
  0.874
GCA_000750635_00482
Unannotated protein.
     
 0.870
GCA_000750635_03812
Unannotated protein.
  
 
 0.667
GCA_000750635_00527
Unannotated protein.
    
   0.645
Your Current Organism:
Oceanobacillus jeddahense
NCBI taxonomy Id: 1462527
Other names: CSUR P1091, DSM 28586, O. jeddahense, Oceanobacillus sp. S5, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.