STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6V36_34120Diguanylate cyclase. (769 aa)    
Predicted Functional Partners:
A6V36_14950
Diguanylate phosphodiesterase.
 
0.984
A6V36_22405
Histidine kinase.
 0.981
A6V36_10550
Chemotaxis protein.
   
 0.980
A6V36_37165
Methyl-accepting transducer domain-containing protein.
   
 0.980
A6V36_19630
Uncharacterized protein.
 
 0.972
A6V36_20205
Histidine kinase.
 0.969
A6V36_08905
Histidine kinase.
 0.966
A6V36_17125
Hybrid sensor histidine kinase/response regulator.
  
 0.965
A6V36_29870
Hybrid sensor histidine kinase/response regulator.
 
 0.965
A6V36_27835
Uncharacterized protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.959
Your Current Organism:
Paraburkholderia ginsengiterrae
NCBI taxonomy Id: 1462993
Other names: Burkholderia ginsengiterrae, Burkholderia ginsengiterrae Farh et al. 2015, Burkholderia panaciterrae, Burkholderia panaciterrae Farh et al. 2015, Burkholderia sp. DCY85, Burkholderia sp. DCY85-1, JCM 19888, JCM 19889 [[Paraburkholderia panaciterrae]], KCTC 42054, KCTC 42055 [[Paraburkholderia panaciterrae]], P. ginsengiterrae, Paraburkholderia ginsengiterrae (Farh et al. 2015) Dobritsa and Samadpour 2016 emend. Dobritsa et al. 2016, Paraburkholderia panaciterrae, Paraburkholderia panaciterrae (Farh et al. 2015) Dobritsa and Samadpour 2016, strain DCY85, strain DCY85-1 [[Paraburkholderia panaciterrae]]
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