STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HY58_02275Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)    
Predicted Functional Partners:
HY58_02270
Rod shape-determining protein MreC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.877
HY58_15265
DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.762
HY58_03525
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
HY58_15195
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.737
HY58_10290
30S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
HY58_02030
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.711
HY58_02805
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
HY58_12430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
HY58_02265
Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.682
HY58_04640
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
Your Current Organism:
Flavihumibacter sp. ZG627
NCBI taxonomy Id: 1463156
Other names: F. sp. ZG627
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.