STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pspF-2QacEdelta1 protein. (96 aa)    
Predicted Functional Partners:
pspA
Regulatory protein for phage-shock-protein operon; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 
 
 0.896
pspC
DNA-binding transcriptional activator; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
   
 0.809
pspB
DNA-binding transcriptional regulator of psp operon; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
   
 0.796
uspE
Stress-induced protein; Function of strongly homologous gene; cell process.
  
     0.731
rpoN
RNA polymerase, sigma 54 (sigma N) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
 
 0.672
qnrB
QnrB2.
     
 0.648
yfbV
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component.
  
     0.629
sapA
Antimicrobial peptide transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
   
 0.592
pulM
Type II secretion system protein M.
  
     0.581
sulI-2
Dihydropteroate synthase type-1.
       0.543
Your Current Organism:
Klebsiella quasipneumoniae
NCBI taxonomy Id: 1463164
Other names: CCTCC AB 206144 [[Klebsiella alba]], CIP 110770, DSM 28212, K. quasipneumoniae subsp. similipneumoniae, KCTC 12878 [[Klebsiella alba]], Klebsiella alba, Klebsiella alba Xu et al. 2015, Klebsiella quasipneumoniae subsp. similipneumoniae, Klebsiella quasipneumoniae subsp. similipneumoniae Brisse et al. 2014, Klebsiella sp. 07A044, Klebsiella sp. CW-D, LMG 24441 [[Klebsiella alba]], LMG:24441 [[Klebsiella alba]], strain 07A044, strain CW-D 3 [[Klebsiella alba]], strain SB30
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.