STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721375_00813Unannotated protein. (555 aa)    
Predicted Functional Partners:
GCA_000721375_05905
Unannotated protein.
    
 0.782
GCA_000721375_05902
Unannotated protein.
     
 0.776
GCA_000721375_02346
Unannotated protein.
  
  
 
0.763
GCA_000721375_04629
Unannotated protein.
  
     0.762
GCA_000721375_05652
Unannotated protein.
 
      0.705
GCA_000721375_02118
Unannotated protein.
 
 0.601
GCA_000721375_00812
Unannotated protein.
       0.541
GCA_000721375_04628
Unannotated protein.
  
     0.522
GCA_000721375_05277
Unannotated protein.
     
  0.499
GCA_000721375_00810
Unannotated protein.
 
     0.465
Your Current Organism:
Actinosporangium sp. NRRLB3428
NCBI taxonomy Id: 1463820
Other names: A. sp. NRRL B-3428, Actinosporangium sp. NRRL B-3428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.