STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721375_02256Unannotated protein. (468 aa)    
Predicted Functional Partners:
GCA_000721375_02258
Unannotated protein.
  
  
 0.838
GCA_000721375_02257
Unannotated protein.
 
     0.814
GCA_000721375_02019
Unannotated protein.
   
    0.477
GCA_000721375_02015
Unannotated protein.
   
    0.459
GCA_000721375_02016
Unannotated protein.
   
    0.453
GCA_000721375_00295
Unannotated protein.
  
     0.428
GCA_000721375_02580
Unannotated protein.
  
     0.421
Your Current Organism:
Actinosporangium sp. NRRLB3428
NCBI taxonomy Id: 1463820
Other names: A. sp. NRRL B-3428, Actinosporangium sp. NRRL B-3428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.