STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721375_04159Unannotated protein. (402 aa)    
Predicted Functional Partners:
GCA_000721375_04160
Unannotated protein.
 
 
 0.999
GCA_000721375_05977
Unannotated protein.
   
 
 0.986
GCA_000721375_05417
Unannotated protein.
  
 
 0.915
GCA_000721375_00328
Unannotated protein.
     
 0.912
GCA_000721375_04353
Unannotated protein.
     
 0.910
GCA_000721375_01825
Unannotated protein.
  
 
 0.907
GCA_000721375_03956
Unannotated protein.
    
 0.906
GCA_000721375_06279
Unannotated protein.
   
 
 0.904
GCA_000721375_06383
Unannotated protein.
  
 0.886
GCA_000721375_04935
Unannotated protein.
    
 0.870
Your Current Organism:
Actinosporangium sp. NRRLB3428
NCBI taxonomy Id: 1463820
Other names: A. sp. NRRL B-3428, Actinosporangium sp. NRRL B-3428
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.