STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721375_04496Unannotated protein. (207 aa)    
Predicted Functional Partners:
GCA_000721375_07465
Unannotated protein.
    
  0.749
GCA_000721375_06424
Unannotated protein.
  
  0.656
GCA_000721375_07326
Unannotated protein.
  
  0.656
GCA_000721375_04497
Unannotated protein.
       0.608
GCA_000721375_02106
Unannotated protein.
    
 0.596
GCA_000721375_06125
Unannotated protein.
  
   
 0.495
GCA_000721375_00384
Unannotated protein.
     
 0.445
GCA_000721375_07403
Unannotated protein.
    
 0.441
GCA_000721375_00377
Unannotated protein.
  
 
  0.434
GCA_000721375_01421
Unannotated protein.
  
 
  0.434
Your Current Organism:
Actinosporangium sp. NRRLB3428
NCBI taxonomy Id: 1463820
Other names: A. sp. NRRL B-3428, Actinosporangium sp. NRRL B-3428
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.