STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716595_04953Unannotated protein. (148 aa)    
Predicted Functional Partners:
GCA_000716595_04951
Unannotated protein.
       0.619
GCA_000716595_04952
Unannotated protein.
       0.610
GCA_000716595_04948
Unannotated protein.
       0.603
GCA_000716595_04949
Unannotated protein.
       0.603
GCA_000716595_04950
Unannotated protein.
       0.603
GCA_000716595_04799
Unannotated protein.
    
 0.570
GCA_000716595_00971
Unannotated protein.
   
    0.538
GCA_000716595_01403
Unannotated protein.
    
  0.533
GCA_000716595_02681
Unannotated protein.
     
 0.469
GCA_000716595_06799
Unannotated protein.
     
 0.469
Your Current Organism:
Saccharothrix sp. NRRLB16314
NCBI taxonomy Id: 1463825
Other names: S. sp. NRRL B-16314, Saccharothrix sp. NRRL B-16314
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.