STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716595_05100Unannotated protein. (770 aa)    
Predicted Functional Partners:
GCA_000716595_05099
Unannotated protein.
 
     0.833
GCA_000716595_00656
Unannotated protein.
 
 
   0.733
GCA_000716595_04161
Unannotated protein.
  
   0.682
GCA_000716595_05101
Unannotated protein.
       0.681
GCA_000716595_05102
Unannotated protein.
       0.592
GCA_000716595_06560
Unannotated protein.
    
  0.586
GCA_000716595_07739
Unannotated protein.
    
  0.586
GCA_000716595_00783
Unannotated protein.
    
 0.583
GCA_000716595_00345
Unannotated protein.
  
     0.579
GCA_000716595_00782
Unannotated protein.
    
 0.579
Your Current Organism:
Saccharothrix sp. NRRLB16314
NCBI taxonomy Id: 1463825
Other names: S. sp. NRRL B-16314, Saccharothrix sp. NRRL B-16314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.