STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716595_06012Unannotated protein. (1082 aa)    
Predicted Functional Partners:
GCA_000716595_00296
Unannotated protein.
  
 0.983
GCA_000716595_02453
Unannotated protein.
    
 0.961
GCA_000716595_07701
Unannotated protein.
 
  
 0.890
GCA_000716595_01994
Unannotated protein.
  
 
 0.869
GCA_000716595_07698
Unannotated protein.
 
 
 0.862
GCA_000716595_04621
Unannotated protein.
 
  
 0.808
GCA_000716595_06011
Unannotated protein.
       0.785
GCA_000716595_03534
Unannotated protein.
  
   0.776
GCA_000716595_03434
Unannotated protein.
    
 0.773
GCA_000716595_05949
Unannotated protein.
  
     0.770
Your Current Organism:
Saccharothrix sp. NRRLB16314
NCBI taxonomy Id: 1463825
Other names: S. sp. NRRL B-16314, Saccharothrix sp. NRRL B-16314
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.