STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720115_00388Unannotated protein. (294 aa)    
Predicted Functional Partners:
GCA_000720115_06442
Unannotated protein.
 
 
 0.968
GCA_000720115_02626
Unannotated protein.
 
 
 0.962
GCA_000720115_01364
Unannotated protein.
  
 
 0.940
GCA_000720115_02623
Unannotated protein.
 
  
0.934
GCA_000720115_04078
Unannotated protein.
  
  
  0.922
GCA_000720115_02629
Unannotated protein.
    
  0.910
GCA_000720115_04007
Unannotated protein.
    
  0.910
GCA_000720115_04000
Unannotated protein.
    
  0.909
GCA_000720115_00387
Unannotated protein.
       0.885
GCA_000720115_01267
Unannotated protein.
  
 
 0.837
Your Current Organism:
Streptomyces sp. NRRLF2580
NCBI taxonomy Id: 1463841
Other names: S. sp. NRRL F-2580, Streptomyces sp. NRRL F-2580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.