STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720115_03267Unannotated protein. (466 aa)    
Predicted Functional Partners:
GCA_000720115_03268
Unannotated protein.
 
  
  0.949
GCA_000720115_01808
Unannotated protein.
       0.581
GCA_000720115_04890
Unannotated protein.
    
 0.549
GCA_000720115_05332
Unannotated protein.
    
 
 0.475
GCA_000720115_00916
Unannotated protein.
  
 0.459
GCA_000720115_03899
Unannotated protein.
  
 0.459
GCA_000720115_00915
Unannotated protein.
   
 0.453
GCA_000720115_04121
Unannotated protein.
   
 0.426
GCA_000720115_04942
Unannotated protein.
   
 0.426
GCA_000720115_06514
Unannotated protein.
   
 0.426
Your Current Organism:
Streptomyces sp. NRRLF2580
NCBI taxonomy Id: 1463841
Other names: S. sp. NRRL F-2580, Streptomyces sp. NRRL F-2580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.