STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720115_03650Unannotated protein. (298 aa)    
Predicted Functional Partners:
GCA_000720115_04592
Unannotated protein.
  
 0.954
GCA_000720115_04619
Unannotated protein.
  
 0.954
GCA_000720115_05009
Unannotated protein.
  
 0.954
GCA_000720115_05010
Unannotated protein.
  
 0.954
GCA_000720115_04408
Unannotated protein.
  
 0.922
GCA_000720115_04407
Unannotated protein.
  
 0.913
GCA_000720115_02422
Unannotated protein.
    
  0.886
GCA_000720115_04547
Unannotated protein.
  
 0.880
GCA_000720115_02423
Unannotated protein.
    
  0.874
GCA_000720115_05321
Unannotated protein.
    
  0.874
Your Current Organism:
Streptomyces sp. NRRLF2580
NCBI taxonomy Id: 1463841
Other names: S. sp. NRRL F-2580, Streptomyces sp. NRRL F-2580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.