STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000716605_03316Unannotated protein. (297 aa)    
Predicted Functional Partners:
GCA_000716605_03315
Unannotated protein.
 
  
 0.957
GCA_000716605_03318
Unannotated protein.
 
  0.955
GCA_000716605_03317
Unannotated protein.
 
     0.948
GCA_000716605_03319
Unannotated protein.
 
     0.902
GCA_000716605_00321
Unannotated protein.
 
  
 
0.891
GCA_000716605_07693
Unannotated protein.
  
  
 
0.828
GCA_000716605_05475
Unannotated protein.
 
  
 
0.815
GCA_000716605_02832
Unannotated protein.
    
 
0.801
GCA_000716605_08073
Unannotated protein.
    
  0.770
GCA_000716605_03320
Unannotated protein.
     
 0.727
Your Current Organism:
Streptomyces sp. NRRLF525
NCBI taxonomy Id: 1463861
Other names: S. sp. NRRL F-525, Streptomyces sp. NRRL F-525
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.