STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720135_02248Unannotated protein. (502 aa)    
Predicted Functional Partners:
GCA_000720135_02247
Unannotated protein.
 
 
  0.933
GCA_000720135_02249
Unannotated protein.
 
     0.928
GCA_000720135_02246
Unannotated protein.
 
     0.915
GCA_000720135_04871
Unannotated protein.
 
 0.871
GCA_000720135_03642
Unannotated protein.
   
  0.849
GCA_000720135_00858
Unannotated protein.
    
   0.810
GCA_000720135_07037
Unannotated protein.
 
 0.807
GCA_000720135_01191
Unannotated protein.
 
 0.801
GCA_000720135_02245
Unannotated protein.
       0.795
GCA_000720135_02399
Unannotated protein.
    
 
 0.791
Your Current Organism:
Streptomyces sp. NRRLS1022
NCBI taxonomy Id: 1463880
Other names: S. sp. NRRL S-1022, Streptomyces sp. NRRL S-1022
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.